High-Protein Keto Almond Flour Muffins with Eggs & Chia

Published: March 31, 2026
Megan PerryMegan Perry
Tags: Breakfast, snack, High-Protein, Low-Carb, Keto

Keto Muffins

Low-carb, protein-packed muffins—perfect for keto breakfasts or snacks.

Prep Time:15 minCook Time:22 minTotal Time:37 minServings:12Difficulty:Easy

Nutrition (per serving)

Calories:170 kcal
Protein:12 g
Carbs:3 g
Fat:13 g

I love these muffins because they’re the kind of weekday shortcut that actually tastes like you cared. They’re dense, moist, and studded with chia and chopped walnuts for crunch, and a scoop of unflavored whey gives them a real protein boost—perfect when you need something quick after a workout or as a grab-and-go breakfast.

They’re simple to make: whisk dry ingredients, fold in the creamy wet mix, scoop into a muffin tin, and bake. The result is a batch of 12 satisfying, low-carb muffins that keep well in the fridge and warm up beautifully.

Ingredients

  • Almond flour:3 cups
  • Unflavored whey protein isolate:1 cup
  • Baking powder:2 tsp
  • Salt:1/2 tsp
  • Erythritol (or preferred keto sweetener):2 tbsp
  • Eggs:4 pieces
  • Cream cheese, softened:4 oz
  • Unsalted butter, melted:6 tbsp
  • Heavy cream:1/4 cup
  • Vanilla extract:2 tsp
  • Chia seeds:2 tbsp
  • Chopped walnuts (optional):1/2 cup

Instructions

  1. Preheat oven to 350°F. Line a 12-cup muffin tin with liners or grease lightly.

    Muffin tin lined with paper cups and lightly greased for baking
  2. In a large bowl whisk together almond flour, whey protein, baking powder, salt, and erythritol until evenly combined.

    Dry almond flour protein muffin ingredients whisked together in a glass bowl
  3. In a separate bowl beat the eggs lightly, then add softened cream cheese, melted butter, heavy cream, and vanilla. Whisk until smooth and homogenous.

    Eggs cream cheese butter cream and vanilla whisked into a smooth muffin mixture
  4. Fold the wet mixture into the dry ingredients until just combined. Stir in chia seeds and chopped walnuts, keeping the batter slightly thick but scoopable.

    Thick almond flour muffin batter folded with chia seeds and chopped nuts
  5. Portion the batter into the muffin tin, filling each cup about 3/4 full. Smooth tops with a spoon.

    High-Protein Keto Almond Flour Muffins with Eggs & Chia
  6. Bake for 20–22 minutes, or until the tops are golden and a toothpick comes out with a few moist crumbs. Avoid overbaking to keep them tender.

    Golden keto almond flour muffins checked with a wooden toothpick after baking
  7. Let muffins cool in the tin 10 minutes, then transfer to a wire rack to cool completely. Store in the fridge up to 5 days or freeze for longer.

    Almond flour chia muffins cooling on a wire rack with tender crumb visible

Tips & Notes

  • If batter seems too thick, add 1–2 tbsp additional heavy cream to reach a scoopable texture.
  • For extra protein but less dairy, swap cream cheese for 1/2 cup Greek yogurt (full fat) and reduce heavy cream by 1 tbsp.